exPt7 — Shona’s Echinacea Hybrids

Here is the dataset for Shona’s Echinacea hybrids. Like Nicholas, Shona used both angustifolia and pallida as maternal plants for crosses. Luckily, Shona’s pallida plants didn’t get mowed, so among these are the first hybrids we’ve grown that have pallida moms!  Seedlings grown in the lab were planted in exPt7 in 2013.

Data for this experiment are stored in two csv files. The first file contains pedigree data. The second file has plant status, leaf counts, and longest leaf measurements per plant for years 2014 – recent. Additional individual leaf measurements are included for years 2014 – 2016. Herbivory data are included for years 2014 – 2016, see descriptions of “damageNote” and “otherNote” fields below. “cgPlaId” and “measureYr” uniquely identify each plant and year measured.  The two data files are related by field “cgPlaId.”

  1. Pedigree: Pedigree and planting data are stored in csv file exPt7HybridPedigree.csv with the following fields:
    cgPlaId — unique plant identifier / integer
    exPt — experimental plot identifier / integer
    row — row identifier / integer
    position — position identifier / decimal
    plugID — plug tray identifier; to link to individual achene / integer
    acheneID — achene identifier; to link to individual achene / integer
    crossType — cross type: maternal_paternal; eg “ang_pal”  / text
    maternalID — maternal plant identifier (tag) / text
    paternalD — paternal plant identifier (tag) / text
    dtPlanted — date planted / date (YYYY-MM-DD)
    plantingNote — planting note / text
  2. Plant measures: Individual survival, plant measurements, and limited herbivory data are stored in csv file exPt7HybridMeasure.csv  with the following fields:
    cgPlaId — common garden plant Id / integer
    measureYr — year of observation / integer
    measuredByInit — initials of measurer / text
    recordedByInit — initials of recorder /text
    measureTsp — time of measure / date/time
    plaStatusDesc — plant status description / text
    basalRosetteCt — basal rosette count / integer
    basalLfCt — basal leaf count; based on ind leaf measures in 2014 thru 2016  / integer
    longestBasalLf — longest basal leaf; based on ind leaf measures in 2014 thru 2016 / integer
    otherNote — other note; 2014 herbivory (eg “lf 1 nibbled”) / text
    otherDamage — other damage / text
    damageNote — damage note; 2014-2016 herbivory Y/N checkbox on form; where checkbox = “Y” updated here as “herbivory” / text
    lf1LengthCm thru lf4LengthCm — individual leaf lengths in cm / integer

exPt7HybridPedigree.csv will remain the most up to date link to the exPt7 Hybrid Pedigree dataset.

exPt7HybridMeasure.csv will remain the most up to date link to the exPt7 Hybrid Measure dataset.

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06/29/2020 gk

I’ve posted data from 2014 – 2019

exPt7HybridMeasure.csv will remain the most up to date link to the exPt7 Hybrid Measure dataset.
exPt7HybridMeasure20200629.csv will link to this version of the exPt7 Hybrid Measure dataset.

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09/15/2017 gk

I’ve posted data from 2014 – 2017.

exPt7HybridMeasure20170915.csv will link to this version of the exPt7 Hybrid Measure dataset.