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2017 update: Demographic census in remnants

We had a big year for censusing plants in natural remnant populations. In 2017 we did both total demo, visiting all plants, and flowering demo, visiting just plants that flowered this year. Check out the chart below to see what we focused on at each site:

Total Demo Aanenson, Around LF (partial), Common Garden, East of Town Hall, East Riley, Hegg Lake, Landfill West, Loeffler Corner East, NRRX, recruit he, recruit hp, recruit hs, Riley, RRX, South of Golf Course, Steven’s Approach, transplant plot
Flowering Demo Around LF, BTG, DOG, Elk Lake Road East, Golf Course, KJs, Krusemark, Landfill East, Liatris Hill, Loeffler Corner West, Near Town Hall, Nessman, NNWLF, North of Golf Course, NWLF, On 27, recruit el, recruit hw, recruit ke, recruit kw, RRXDC, Staffanson East Unit, Staffanson West Unit, Tower, Town Hall, West of Aanenson, Woody’s, Yellow Orchid Hill East, Yellow Orchid Hill West

We stake to locations where flowering plants have been found in the past and place a flag there. This is the East Riley roadside remnant, an area with a lot of Echinacea close together and a high chance of getting mowed.

When we find a new flowering Echinacea plant, we give it a tag and get its location with a survey-grade GPS (better than 6 cm precision). Then, we can revisit this plant for years to come and monitor its survival and reproduction.

This season we added 5945 demo records and about 1375 survey records to our database. After over 20 years of this method, we now have a very rich longitudinal dataset of life histories including thousands of plants. REU Will Reed was a huge help organizing demo tasks for Team Echinacea over the summer and helping out with demap (the demographic census database) during the year.

Year started: 1996

Location: Roadsides, railroad rights of way, and nature preserves in and near Solem Township, Minnesota.

Overlaps with: Flowering phenology in remnants, fire and flowering at SPP

Data collected: demo records include Flowering status, number of rosettes, number of heads, neighbors within a 12 cm radius of plants found. These are all taken with PDAs that sync with an MS Access database. They are all transferred to the demap R repository in bitbucket with git version control.

GPS points shot: Points for each flowering plant this year shot mostly in SURV records, stored in surv.csv. Each location should be either associated with a loc from prior years or a point shot this year.

Products:

  • Amy Dykstra’s dissertation included matrix projection modeling using demographic data
  • Project “demap” merges phenological, spatial and demographic data for remnant plants

You can find out more about the demographic census in the remnants and links to previous posts regarding it on the background page for this experiment.

2017 Update: Braker’s REU Project

Wes Braker, an REU student in summer 2017, characterized the vegetation in remnant prairie, restored prairie, and old agricultural fields at Hegg Lake State Wildlife Management Area. Prairie communities with a large variety of native plant species are considered generally healthy communities. Wes wanted to characterize the plant communities at these sites and provide information to land managers.

Each area at Hegg Lake WMA was classified as remnant prairie, restored prairie, or abandoned agricultural field. Using Google Earth, areas were mapped out and labeled and three areas were chosen based on their availability for sampling, for a total of 27 study areas. Wes sampled vegetation each week for a total of 8 weeks across the growing season.

A snapshot of the landscape at Hegg Lake State Wildlife Management Area.

The purpose of this project was to characterize the vegetation at this site, building a species list for use by the Minnesota Department of Natural Resources for potential use in local seed sourcing for future restorations. From this project, Wes identified 25 native prairie species for use in future Hegg Lake seed collections. In addition, he identified 80 unique plant species at this site.

2017 Update: Inbreeding experiment–INB2

Reina, Pamela, and Mike with the photosynthesis machine used in Kittelson et al. (2015)

In 2017, of the original 1,470 plants in INB2, 473 were still alive. Of the plants that were alive this year, only 4 were flowering (0.8%) and 71% have never flowered. Interestingly, there are differences in survival for each cross level. 31% of the most inbred plants were living in 2017, compared to 39% of the plants in the between-remnant cross level. All individuals were planted in 2006.

The INB2 experiment investigates the relationship between inbreeding level and fitness in Echinacea angustifolia. Each plant in experiment INB2 originates from one of three cross types, depending on the relatedness of the parents: between maternal half siblings; between plants from the same remnant, but not sharing a maternal or paternal parent; and between individuals from different remnants. We continued to measure fitness and flowering phenology in these plants.

Read previous posts about this experiment.

Start year: 2006

Location: Experimental plot 1

Overlaps with: Phenology and fitness in P1, Inbreeding experiment–INB1

Physical specimens: We harvested 2 heads from INB2 that will be processed in the lab with other heads harvested from P1.

Data collected: We used handheld computers to collect fitness data on all plants in INB2.

Products: The below papers were published in summer 2015:

Kittelson, P., S. Wagenius, R. Nielsen, S. Qazi, M. Howe, G. Kiefer, and R. G. Shaw. 2015. Leaf functional traits, herbivory, and genetic diversity in Echinacea: Implications for fragmented populations. Ecology 96:1877–1886. PDF

Shaw, R. G., S. Wagenius and C. J. Geyer. 2015. The susceptibility of Echinacea angustifolia to a specialist aphid: eco-evolutionary perspective on genotypic variation and demographic consequences. Journal of Ecology 103:809-818. PDF

You can find more information about the Inbreeding experiment–INB2 and links to previous flog posts regarding this experiment at the background page for the experiment.

2017 Update: Inbreeding experiment–INB1

2013-06-19-12-29-42

Reina, Hattie, and Mike with the instrument used to measure photosynthesis in 2013.

In 2017, of the original 557 plants in INB1, 180 were still alive. Of the plants that were alive this year, 7 (4%) were flowering and 23% have never flowered. Interestingly, there are differences in survival for each cross level. 21% of the most inbred plants were living in 2017, compared to 39% of the plants in the between remnant cross level. All individuals were planted in 2001.

The INB1 experiment investigates the relationship between inbreeding level and fitness in Echinacea angustifolia. Each plant in experiment INB1 originates from one of three cross types, depending on the relatedness of the parents: between maternal half siblings; between plants from the same remnant, but not sharing a maternal or paternal parent; and between individuals from different remnants. We continued to measure fitness and flowering phenology in these plants.

Read previous posts about this experiment.

 

Start year: 2001

Location: Experimental plot 1

Overlaps with: Phenology and fitness in P1

Physical specimens: We harvested 6 heads from INB1 that will be processed in the lab with other heads harvested from P1.

Data collected: We used handheld computers to collect fitness data on all plants in INB1.

Products: The below papers were published in summer 2015:

Kittelson, P., S. Wagenius, R. Nielsen, S. Qazi, M. Howe, G. Kiefer, and R. G. Shaw. 2015. Leaf functional traits, herbivory, and genetic diversity in Echinacea: Implications for fragmented populations. Ecology 96:1877–1886. PDF

Shaw, R. G., S. Wagenius and C. J. Geyer. 2015. The susceptibility of Echinacea angustifolia to a specialist aphid: eco-evolutionary perspective on genotypic variation and demographic consequences. Journal of Ecology 103:809-818. PDF

You can find more information about the Inbreeding experiment–INB1 and links to previous flog posts regarding this experiment at the background page for the experiment.

2017 Update: Barto’s REU project

Ashely Barto, an REU student in summer 2017, developed an independent project looking at how pollination influences reproductive success in Echinacea angustifolia. She was interested in how heads that get pollinated each day differ from heads that only get visited infrequently, but receive a lot of pollen on those sporadic visits.

Over 19 days in July 2017, 1980 styles from 21 capitula were pollinated following a randomly assigned pollination schedule: pulse or steady. Capitula assigned to the pulse pollination treatment received pollen on all emergent styles at the same time, so there was a range of style ages. Steady pollination capitula received pollen daily, so all styles were pollinated on the day they emerged. Style shriveling, a proxy for pollination, was used as the response variable.

Using a generalized linear model, interactions between style age, floret position, and pollination treatment were considered to create a pollination rate model. Style age and pollination treatment did not interact or have an additive effect on pollination rates. Instead, floret position within the capitulum was the only factor essential to modeling pollination rates in Echinacea. The results suggest resource allocation plays a major role in Echinacea reproduction. Ashley will investigate seed set from the same capitula later this year to further elucidate the role of style age, floret position, and pollination treatments in Echinacea reproduction.

Echinacea on its third day flowering. Within the disc florets, there are persisting styles in Row 1 (A), fresh styles in Row 2 (B), and new anthers in Row 3 (C).

 

Ashley presented her work at the 2017 Arkansas INBRE Conference on October 28. Arkansas INBRE is the Arkansas Institutional Development Award’s network of biomedical research conference, and this year, it was hosted at the University of Arkansas. While this conference attracted undergraduates from many states to present on biomedical research in biology, chemistry, and physics, there were many posters like Ashley’s sharing summer research outside of the medical scope central to the conference’s theme. Ashley was able to talk about the Echinacea Project’s big picture work and how her independent REU Project fit into that larger image.

Ashley presenting her summer REU project at the Arkansas INBRE Conference in October 2017.

Start year: 2017

Location: Nice Island, prairie remnant

Physical specimens: 

  • 21 harvested Echinacea heads at the CBG, ready for cleaning and x-ray

Products: Here’s Ashley’s Poster of her results.

Anne and Leslie rechecking Echinacea

Anne and Leslie are hard at work rechecking heads that have been cleaned from 2016. This is an important job in our ACE protocol as it makes sure that no achenes are left behind before they get counted and randomized!

Anne and Leslie rechecking Echinacea heads from 2016

2017 Update: Fire & fitness of EA

In 2017, we searched in 7 recruitment plots for flowering Echinacea angustifolia plants. For each flowering plant, we took demographic data- counting the number of rosettes, counting the number of flowering heads, and shooting a GPS point of the exact location of the plant. Four plots had no flowering plants, but three of the plots had a total of 43 flowering Echinacea plants. Of the plots with flowering plants, two plots (with 35 of the flowering plants) are located at Hegg Lake, a site managed by the Minnesota DNR, and one plots (with 8 flowering plants) is located at Eng Lake.

This recruitment experiment was originally established in 2000 to quantify seedling emergence and juvenile survival of Echinacea angustifolia during its reintroduction to sites with varying land-use history and burn schedules. Before 2014, detailed data was collected on each plant in the plots. Since 2014, we’ve censused each plot yearly to collect demographic data for every flowering plant.

Echinacea at Hegg Lake, photo by Wes Braker 

Year started: Plantings in 2000-2002

Location: Ten study plots on state land with different land use histories: old-field and restored grassland.

Overlaps with: Demographic census in remnants

Data collected: Status, rosette count, flowering head count, GPS point for each flowering plant in each recruitment plot

Products:A paper (Wagenius et al. 2012) published in Restoration Ecology.

You can find more information about the effects of fire on seedling recruitment of Echinacea angustifolia on the background page for the experiment.

2017 update: Dykstra’s local adaptation experiment

This summer, Amy and members of Team Echinacea continued to monitor the progress of Echinacea plants in her local adaptation plots. We found 221 basal plants, but no flowering plants this year. Amy has 3 sites: Western South Dakota, Central South Dakota, and West Central Minnesota. At each site achenes from all sites have been sowed. Team Echinacea is able to help with the assessment of survival and fitness traits of the individuals in the Minnesota plot.

Amy presents her local adaptation research so far at lunch this summer.

Start year: 2008

Location: Grand River National Grassland (Western South Dakota), Samuel H. Ordway Prairie (Central South Dakota), Staffanson Prairie Preserve (West Central Minnesota), and Hegg Lake WMA (West Central Minnesota).

Overlaps with: Dykstra’s interpopulation crosses

Data collected:  Plant fitness measurements (plant status, number of rosettes, number of leaves, and length of longest leaf)

You can find more information about Amy’s local adaptation experiment and links to previous flog posts regarding this experiment at the background page for the experiment.

2017 update: Dykstra’s interpopulation crosses

This summer, we found 68 basal plants in the crossing experiment. None of these plants have ever flowered, but maybe next year! We measured plant status, number of rosettes, number of leaves, and length of the longest leaf of the individuals. We also noted damage (herbivory) to the leaves.

These data will allow Amy to test how mating with individuals from other populations affects Echinacea fitness. She planted 15,491 achenes, the offspring of crosses from six of the largest remnant populations. Populations might either benefit or suffer from crossing with plants from another population.

Hegg Lake WMA

Start year: 2008

Location: Hegg Lake WMA

Overlaps with: Dykstra’s local adaptation

Data collected: Plant fitness measurements (plant status, number of rosettes, number of leaves, and length of longest leaf)

Products: Read about Amy’s analysis of the interpopulation crossing experiment in her flog post.

You can find more information about Amy’s experiment and links to previous flog posts regarding this experiment at the background page for the experiment.

2017 update: Common garden experiment–1996 cohort

In 2017 only 2% of the surviving members of the 1996 cohort flowered!

In 2017 only 7 plants flowered of the surviving 284 plants in the 1996 cohort. That means that 44% of the original plants are surviving and only 2% of the living individuals flowered! Five percent of living individuals flowered in 2016. In contrast, 45% of living plants flowered in 2015, followed by 37%, 34%, and 40% from 2014 back to 2012. We found that of the original 646 individuals, 284 were alive in 2017, only 7 fewer than last year. We are not sure why so few plants flowered this year. It’s possible that lack of fire in the plot influenced flowering rates. This plot was due for a prescribed burn in spring 2017, but weather and scheduling conflicts kept us from burning.

The 1996 cohort has the oldest Echinacea plants in experimental plot 1; they are 21 years old. They are part of a common garden experiment designed to study differences in fitness and life history characteristics among remnant populations. Every year, members of Team Echinacea assess survival and measure plant growth and fitness traits including plant status (i.e. if it is flowering or basal), plant height, leaf count, and number of flowering heads. We harvest all flowering heads in the fall, count all achenes, and estimate seed set for each head in the lab.

Start year: 1996

Location: Experimental plot 1

Overlaps with: phenology in experimental plots, qGen3, pollen addition/exclusion

Physical specimens:

  • We harvested 8 heads. At present, they await processing in the lab to find their achene count and seed set.

Data collected:

  • We used Visors to collect plant growth and fitness traits—plant status, height, leaf count, number of flowering heads, presence of insects—these data have been added to the database
  • We used Visors to collect flowering phenology data—start and end date of flowering for all individual heads—which is ready to be added to the exPt1 phenology dataset
  • Eventually, we will have achene count and seed set data for all flowering plants (stay tuned)

Products:

  • See the exPt1 core dataset where yrPlanted == ‘1996’ for 1996 cohort fitness measurements

You can find more information about the 1996 cohort and links to previous flog posts regarding this experiment at the background page for the experiment.